Congrats Chris, paddletails have rarely been bred so far. Perhaps yours were already in condition from the wild, but it's a very cool occurence nonetheless. Hope they breed for you next year too. What country are you in, btw?
About the eggs...I disagree with Kai (though he may very well be right) about introducing the female back to the eggs. I think if she's already abandoned them, she might very well eat them under the stress of a new tank. I'd say it's a 50/50 chance either way, but I'd keep them seperate because I've had good success rearing eggs seperately from species that normally guard eggs.
Good luck, and keep us posted. Take pictures if you can.